FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832092

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832092
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12966924
Sequences flagged as poor quality0
Sequence length57-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1322500.014.299211120
CGTATCA617900.09.932966120
CATTAAA456500.09.502088120
GTATCAT607950.09.197495120
TCATTAA478050.09.123943120
CCGTATC712150.09.048037120
CCCCCCT10651.4921534E-79.0136411
GCCGTAT762200.08.878951120
ATCATTA542400.08.727279120
CGCCGTA817700.08.679851120
TATCATT629700.08.574925120
GGTCGCC993850.08.209933120
GCGTCGG104600.08.144758120
TCGCCGT919900.08.093804120
TGGTCGC1030500.07.976165120
GTCGCCG978150.07.838752120
GGTGGTC1190800.07.814379120
GTGGTCG1115600.07.7764487120
TTAAAAA524000.07.579634120
CCCCCCG14251.9505569E-77.57857471
Produced by FastQC (version 0.11.5)