FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832094

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832094
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14985683
Sequences flagged as poor quality0
Sequence length71-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT281650.09.308666120
GTAGATC411850.08.886005120
AGAGTGT460350.08.862099120
AGTGTAG391450.08.79734120
TCGGTGG224800.08.700357120
GAGTGTA421400.08.641914120
GTGGTCG159800.08.409826120
ATCTCGG265350.08.388235120
GATCTCG292350.08.372842120
AGATCTC283050.08.3723955120
GTGTAGA389350.08.320882120
TCTCGGT230300.08.153915120
TAGGGAA750350.08.019603120
GCGTCGG95300.07.869242120
AAGAGTG518500.07.8450685120
CTCGGTG238500.07.735269118-119
TGTAGAT430650.07.7179346120
TGTAGGG834950.07.573488120
TGGTCGC152200.07.5289516120
GTGTAGG905550.07.5263033120
Produced by FastQC (version 0.11.5)