FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832098

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832098
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16954446
Sequences flagged as poor quality0
Sequence length53-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2387800.014.804227120
ATCATTA887950.010.263375120
GTATCAT1022150.09.960661120
TCCGATC73000.09.9451863
TCATTAA798050.09.8708725120
CGTATCA1064600.09.828358120
CCGTATC1183000.09.691631120
CATTAAA792750.09.414669120
CCGATCT67650.09.4013124
CGCCGTA1414500.09.276129120
GCCGTAT1311100.09.275533120
CCCCCTG14403.45608E-119.1682711
GGTCGCC1676000.09.017271120
TATCATT1059100.08.910718120
TGGTCGC1798800.08.785244120
CCCCCAC12401.8515493E-88.7112021
GTCGCCG1632650.08.576868120
TCGCCGT1566800.08.355302120
GTGGTCG1932100.08.309548120
CCCCTAA11706.2408617E-78.2065641
Produced by FastQC (version 0.11.5)