FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14774746
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT285150.09.215614120
AGTGTAG385700.08.586437120
TCTCGGT242000.08.528382120
AGAGTGT451500.08.424713120
GTGGTCG176200.08.37631120
ATCTCGG270600.08.225639120
AAGAGTG506650.08.218167120
GTGTAGA382850.08.164557120
TAGGGAA732350.08.126744120
GTAGATC408100.08.071036120
TGGTCGC159750.07.9619336120
GAGTGTA414000.07.898047120
GTAGGGA762350.07.81481120
AGATCTC290950.07.722536118-119
GATCTCG308250.07.6102204120
TGTAGGG818050.07.568737120
TGTAGAT427950.07.542456120
GCGTCGG105100.07.5352006120
GGTGGTC204650.07.446386120
CGTGTAG934250.07.2823834120
Produced by FastQC (version 0.11.5)