FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832118

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832118
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12415606
Sequences flagged as poor quality0
Sequence length58-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT255900.09.566352120
GAGTGTA388900.09.2569895120
GTGTAGA354300.08.924748120
AGTGTAG355850.08.83529120
TCTCGGT219700.08.630054120
AGAGTGT430550.08.445114120
AGATCTC260650.08.356133120
GCGTCGG65600.08.140342120
AAGAGTG484550.08.098333120
TGGTCGC139200.07.974234120
GTAGATC362750.07.8898263120
GGTCGCC146950.07.798665120
TAGGGAA680200.07.7536955120
ATCTCGG246950.07.6534634120
GTGTAGG817400.07.4652233120
GTAGGGA708050.07.448716120
TGTAGAT387200.07.3606267120
TGTAGGG753750.07.355313120
GTGGTCG152150.07.354688118-119
CTCGGTG208900.07.324167120
Produced by FastQC (version 0.11.5)