FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11482565
Sequences flagged as poor quality0
Sequence length57-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC245800.010.007397120
TAGATCT249100.09.561718120
AGTGTAG348450.09.366506120
GTGTAGA343150.09.248916120
AGAGTGT414300.09.079705120
GAGTGTA376450.08.845142120
TCTCGGT204550.08.593841120
GATCTCG256800.08.410594120
AAGAGTG468300.08.378625120
GTAGATC353550.08.162315120
CTCGGTG207450.08.039898120
GCGTCGG82400.07.9363065120
TCGGTGG199350.07.915141120
TGTAGGG759000.07.857127120
GTAGGGA708650.07.8312144120
TAGGGAA679050.07.8015003120
ATCTCGG233200.07.7181263120
TGGTCGC134600.07.7111692120
TGTAGAT361050.07.5773377120
CGGTGGT203500.07.488391120
Produced by FastQC (version 0.11.5)