FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14046656
Sequences flagged as poor quality0
Sequence length73-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG364900.08.451319120
TAGATCT256250.08.445388120
GAGTGTA390150.08.412828120
AGATCTC255650.08.277093120
GTGTAGA357100.08.013054120
AGAGTGT429900.07.844701120
ATCTCGG259000.07.752248120
TCTCGGT233150.07.7351155120
GTAGATC358900.07.7048707120
GTAGGGA695800.07.6892953120
AAGAGTG481100.07.509657120
TGTAGGG740150.07.4315996120
TGTAGAT398300.07.3803935120
GATCTCG261000.07.3447027118-119
CTCGGTG226100.07.2850237120
TAGGGAA667450.07.241329120
TCGGTGG223600.06.963201120
GTCGTGT952700.06.934617120
GTGTAGG802600.06.8758197120
GGGAAAG669550.06.8415256120
Produced by FastQC (version 0.11.5)