FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832144

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832144
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11352619
Sequences flagged as poor quality0
Sequence length100-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA656850.010.732182120
GGTCGCC418500.08.931182120
GCGTCGG60200.08.8697195120
TCGCCGT394650.08.497988120
CGCCGTA349450.08.24086120
TGGTCGC429700.08.070117118-119
CGTATCA290700.08.048889120
GTGGTCG468300.08.0198555120
GTATCAT305250.07.9993577120
GGTGGTC511100.07.888233120
GTCGCCG408950.07.878081120
TCATTAA235650.07.8415093120
GCCGTAT339300.07.69169120
CGGTGGT575250.07.4257402120
ATCATTA274200.07.264187120
TCGGTGG597050.07.1847506120
CTCGGTG619850.07.1334114120
CCGTATC341400.07.099606120
TCTCGGT644950.06.883702120
CATTAAA239100.06.7497716120
Produced by FastQC (version 0.11.5)