FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832148

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832148
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12293331
Sequences flagged as poor quality0
Sequence length62-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2012950.014.787239120
CCGTATC903150.08.961958120
CGTATCA822250.08.9315815120
TCATTAA638350.08.854069120
GTATCAT798200.08.832365120
ATCATTA707750.08.799709120
CCGATCT55550.08.7488674
GCGTCGG68000.08.64705120
CATTAAA619750.08.616369120
GCCGTAT958150.08.579024120
CGCCGTA1013250.08.450028120
TATCATT814350.08.377226120
TGGTCGC1311700.08.265602120
GTCGCCG1172750.08.150067120
TCGCCGT1107450.08.1430235120
GGTCGCC1231200.08.109154120
TCCGATC63150.07.980993
GTGGTCG1405050.07.759147120
GGTGGTC1502100.07.7491446120
CGATCTA15056.0434104E-87.57474335
Produced by FastQC (version 0.11.5)