FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13696801
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC311650.08.758588120
TGGTCGC258850.08.575183120
GATCTCG480450.08.428405120
TAGATCT484750.08.267011120
GGTCGCC268950.08.208543120
AGATCTC466650.08.1119995120
AGTGTAG658350.08.055366120
GTGGTCG285050.08.018512120
TCTCGGT408600.07.943076120
ATCTCGG448300.07.841852120
AGAGTGT753850.07.7988567120
CTCGGTG392700.07.775829120
GCGTCGG102200.07.631014120
TCGGTGG364050.07.62974120
AAGAGTG825200.07.575273120
GTAGATC651900.07.5553045120
GAGTGTA702950.07.5528116120
TGTAGAT672000.07.4543023120
CGGTGGT365650.07.4486933120
GTGTAGA643750.07.4086604120
Produced by FastQC (version 0.11.5)