FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832156

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832156
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14391011
Sequences flagged as poor quality0
Sequence length56-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT438450.09.550571120
TGGTCGC264900.09.353241120
GGTCGCC261750.09.213685120
TAGATCT552350.09.112585120
CTCGGTG413100.08.989374120
AGATCTC534500.08.900604120
ATCTCGG472800.08.691748120
GGTGGTC326200.08.680646120
GTGTAGA730150.08.6518755120
GTGGTCG293250.08.612676120
GATCTCG513900.08.416871120
TCGGTGG392050.08.370277120
GAGTGTA809100.08.341503120
AGTGTAG750950.08.30838120
GTCGCCG290400.08.263373120
CGGTGGT381900.07.9958043120
CGCCGTA238500.07.948638120
AAGAGTG958950.07.9388876120
AGAGTGT871050.07.879107120
GTAGATC732350.07.7247963120
Produced by FastQC (version 0.11.5)