FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832158

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832158
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20141071
Sequences flagged as poor quality0
Sequence length55-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC500800.07.8471484120
GGTCGCC403300.07.7061315120
AAAAAAA1037850.07.6597786120
TGGTCGC413500.07.6466284120
CTCGGTG612250.07.5260544120
TCTCGGT635050.07.3881164120
GTGGTCG446650.07.374624120
TCGGTGG578700.07.2988434120
ATCTCGG681300.07.159572120
TAGATCT761100.06.9922476120
GAGTGTA1025700.06.9315906120
CGGTGGT568150.06.8535657120
CGCCGTA376500.06.8204603120
AGTGTAG969500.06.702172120
AGATCTC760700.06.6804376120
GTCGCCG412000.06.625964120
AGAGTGT1106450.06.6100817120
GATCTCG755850.06.604236120
GTGTAGA957750.06.502496120
TCGCCGT431500.06.3404336120
Produced by FastQC (version 0.11.5)