FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832172

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832172
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15172508
Sequences flagged as poor quality0
Sequence length67-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC397200.08.791191120
GGTCGCC385450.08.545516120
AAAAAAA776900.08.479519120
GTGGTCG434000.08.41902120
GGTGGTC480950.08.208427120
CGTATCA289750.08.096313120
CGCCGTA346450.08.070107120
GATCTCG701000.07.9255047120
TAGATCT762450.07.7274127120
CGGTGGT547350.07.6620684120
GTCGCCG407750.07.6073003120
CTCGGTG600100.07.50845120
TCGGTGG567000.07.3224597120
ATCTCGG666350.07.275167120
GTAGATC929100.07.1808577120
GCCGTAT344550.07.17429120
AGATCTC732500.07.134187120
GCGTCGG84100.07.13408120
GTGTAGA968450.07.0873327120
AGTGTAG995700.07.0861897120
Produced by FastQC (version 0.11.5)