FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832206

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832206
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12270005
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC283400.08.426317120
TAGATCT283600.08.09228118-119
GATCTCG276750.08.086783120
GGTGGTC190800.08.050376120
GAGTGTA410450.08.0254120
ATCTCGG265250.07.8718796120
GTGTAGA383600.07.7112164120
TGGTCGC156700.07.5814238120
TCTCGGT246550.07.5198307120
AGTGTAG381500.07.4782805118-119
CTCGGTG236750.07.450955120
GTGGTCG175650.07.4466844120
GTAGATC370350.07.420065120
AAGAGTG494150.07.21244120
AGAGTGT442300.07.189746120
TCGGTGG230450.07.1859956120
GCGTCGG61900.07.075983120
TGTAGAT406550.06.9955034120
GTAGGGA697400.06.942984120
GGTCGCC163550.06.7135944120
Produced by FastQC (version 0.11.5)