FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12680956
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA613500.010.620133120
TGGTCGC403150.07.8276935120
GTGGTCG443700.07.815435120
CGTATCA269050.07.670791120
TCATTAA205050.07.4024496120
CCGTATC336350.07.40238120
ATCTCGG642750.07.3926105120
GGTCGCC411400.07.3790584120
CGGTGGT531100.07.3200397120
GGTGGTC469600.07.154424118-119
TCTCGGT597750.07.0859785120
CTCGGTG580100.07.063705120
GTATCAT278150.07.0315847120
GATCTCG694950.07.027252120
TAGATCT712250.06.949222120
AGATCTC692750.06.936984120
CGCCGTA365050.06.9190183120
GTCGCCG453700.06.9158826120
TCGGTGG543650.06.908276120
ATCATTA246050.06.8760734120
Produced by FastQC (version 0.11.5)