FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11292989
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA742150.010.088891120
GGTCGCC417300.09.302002120
GTGGTCG472550.08.925408120
GCGTCGG68600.08.920652120
TGGTCGC435550.08.815815120
GCCGTAT332950.08.757453120
TCGGTGG606150.08.591325120
GGTGGTC520800.08.570823120
CGCCGTA355200.08.462239120
AGATCTC835200.08.418945120
TCGCCGT410050.08.383751120
GTCGCCG418950.08.277252120
CGGTGGT581500.08.243613120
CGTATCA263650.08.237613118-119
TCTCGGT693450.08.0634575120
ATCTCGG745500.07.9431120
CTCGGTG650750.07.9195323120
CCGTATC317950.07.8497357120
GTATCAT295250.07.7623634120
GATCTCG798800.07.623397120
Produced by FastQC (version 0.11.5)