FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832224

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832224
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14413384
Sequences flagged as poor quality0
Sequence length63-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT302750.09.710714120
AGATCTC290000.09.184007120
GTGTAGA421300.09.133033120
GAGTGTA462700.08.900563120
AGAGTGT506900.08.871677120
ATCTCGG280650.08.633094120
AGTGTAG425550.08.600466118-119
GCGTCGG83700.08.404016120
CTCGGTG250800.08.342154120
GATCTCG297300.08.19005120
TCTCGGT260300.08.060792120
GTAGATC420500.07.9494166120
TGTAGAT461800.07.9024405120
GTGGTCG184800.07.84046120
AAGAGTG570100.07.698361120
GTAGGGA847500.07.6756296120
TCGGTGG240650.07.594762120
TGGTCGC162300.07.5938463120
TAGGGAA811600.07.4447556120
GGGAAAG799850.07.388758120
Produced by FastQC (version 0.11.5)