FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832226

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832226
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12661604
Sequences flagged as poor quality0
Sequence length98-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGGA204700.011.283102120
TAGGGAA194700.010.2912035120
GTCGTGT325100.010.093831120
TGTAGGG226250.010.075826120
CGTGTAG280450.010.032358120
AGTGTAG92050.09.710646120
GTGTAGG261950.09.43549120
TCGTGTA309450.09.402361120
GAGTGTA106050.09.390378120
CGTCGTG374400.09.277445120
TAGATCT63700.08.475956120
AAGAGTG161500.08.469309120
GCGTCGT402150.08.458252118-119
AGAGTGT133600.08.3969345120
AGCGTCG436050.08.199656120
GAGCGTC483250.08.131208120
CTAGATC57550.07.818106120
AGAGCGT538800.07.7827883120
GTAGATC116850.07.7523594120
GAAGAGC657650.07.5439076120
Produced by FastQC (version 0.11.5)