FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832250

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832250
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14433415
Sequences flagged as poor quality0
Sequence length58-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG288200.09.971834120
TAGATCT594400.09.851549120
TCGGTGG395500.09.648151120
GGTGGTC319700.09.64615120
AGATCTC558700.09.48234120
GATCTCG538300.09.418155120
CTCGGTG434100.09.398372120
GCGTCGG88400.09.366133120
TGGTCGC261050.09.07835120
ATCTCGG515000.09.052057120
CGGTGGT372400.09.038299120
AGTGTAG823700.08.9155035120
GGTCGCC258550.08.86446120
GATCCAT56700.08.7826791
GTGTAGA786200.08.653933120
TCTCGGT468650.08.5902815120
GTAGATC791550.08.322571120
GAGTGTA886250.08.225334120
TGTAGAT820300.08.213732120
AGAGTGT963400.08.10845120
Produced by FastQC (version 0.11.5)