FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15079559
Sequences flagged as poor quality0
Sequence length75-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT544900.010.2172165120
AGATCTC517950.09.995956120
GATCTCG510300.09.569743120
GCGTCGG98650.09.487001120
CTCGGTG395500.09.374398120
ATCTCGG459700.09.370254120
TGGTCGC252700.09.353893120
AGTGTAG757150.09.262624120
GGTGGTC303400.08.917896120
CGGTGGT353200.08.917437120
AGAGTGT884500.08.871792120
GAGTGTA813950.08.86685120
GTGGTCG275550.08.861259120
TCTCGGT409100.08.842789120
GTGTAGA724100.08.823735120
TCGGTGG358100.08.812169120
GTAGATC728650.08.587501120
AAGAGTG976550.08.471712120
GGTCGCC258950.07.8307295120
TGTAGAT763150.07.6804395120
Produced by FastQC (version 0.11.5)