FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832262

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832262
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14385730
Sequences flagged as poor quality0
Sequence length73-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT303200.09.735714120
AGTGTAG425250.09.269428120
AGATCTC297850.09.024276120
GCGTCGG79200.08.63598120
GTGGTCG169000.08.626835120
TGTAGAT457500.08.602896120
AGAGTGT501900.08.594955120
TGGTCGC154150.08.3681120
GATCTCG299550.08.352158120
GTGTAGA411700.08.335854118-119
GAGTGTA456700.08.302674120
TCTCGGT252600.08.170658120
GTAGATC415600.08.098773120
ATCTCGG274350.07.9821496120
AAGAGTG560150.07.8832517120
GGTGGTC194650.07.767442120
TGTAGGG872900.07.725628120
CTCGGTG245150.07.635802120
GTAGGGA817400.07.5969214120
CGGTGGT239700.07.484022120
Produced by FastQC (version 0.11.5)