FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832264

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832264
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12348563
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC389150.08.798449120
TGGTCGC319350.08.614832120
GTGGTCG347250.08.303233120
GGTCGCC311350.08.199518120
CTCGGTG475200.08.153265120
CGTATCA220200.08.020072120
GATCTCG579050.07.9047318120
CCGTATC268000.07.8672066120
GTCGCCG318350.07.7927985120
TCGGTGG449800.07.678858120
TCTCGGT503200.07.651836120
TAGATCT621000.07.6125717120
ATCTCGG541550.07.6091094120
AGATCTC596950.07.607327120
CGCCGTA274000.07.5853176120
AAAAAAA671150.07.4643965120
CGGTGGT446500.07.3320146120
GTGTAGA786700.07.253752120
GCCGTAT262300.07.239728118-119
GTAGATC756400.07.1393137120
Produced by FastQC (version 0.11.5)