FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11393816
Sequences flagged as poor quality0
Sequence length52-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA794200.012.199878120
TCATTAA262600.09.915346120
GCCGTAT429200.09.379413120
TGGTCGC579000.09.253068120
CGTATCA342450.09.19761120
CGCCGTA467900.08.770329120
GGTGGTC685500.08.734458120
GTATCAT344150.08.664062120
CCGTATC405100.08.574903120
GGTCGCC559500.08.513993120
GTGGTCG628000.08.511987120
GTCGCCG588350.08.382025120
GCGTCGG101100.08.129846120
ATCATTA309000.08.1157875120
CGGTGGT759700.08.039306120
TCGGTGG798950.08.034837120
CATTAAA262950.07.8258915120
CTCGGTG862200.07.772452120
ATCTCGG975300.07.7384734120
GATCTCG1053100.07.4174433120
Produced by FastQC (version 0.11.5)