FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14619245
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG305200.08.88506120
TAGATCT537550.08.53786120
TGGTCGC274000.08.385996120
CTCGGTG425200.08.381073120
GGTCGCC271600.08.283387120
GGTGGTC335300.08.015875120
AGTGTAG719250.07.932445120
TCGGTGG397800.07.8875723120
ATCTCGG478100.07.855286120
GTGTAGA698100.07.83761120
GCGTCGG78000.07.691514120
TCTCGGT441700.07.6876826120
GTAGATC676500.07.6267076120
AGATCTC530050.07.4589043120
GATCTCG522950.07.4569225120
GTCGCCG296750.07.399405120
GAGTGTA763950.07.311242120
AAGAGTG895400.07.2429423120
TGTAGAT726900.07.213453120
CGGTGGT387700.07.0563593118-119
Produced by FastQC (version 0.11.5)