FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14804865
Sequences flagged as poor quality0
Sequence length60-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGGC8050.013.41505116-117
CCCTAGT9650.012.74509146-47
GCCCTAG11300.010.08766844-45
ACTAGGG10300.09.9021015116-117
TGGTCGC328900.08.920033120
CGTATCA196500.08.884888120
TCTCGGT513300.08.637632120
GGTGGTC386150.08.483169120
GGTCGCC333900.08.463033120
TAGATCT651850.08.449219120
ATCTCGG563200.08.4262705120
TCGGTGG451250.08.402748120
GTGGTCG352250.08.345774120
CGGTGGT440400.08.201074120
AGATCTC632950.07.943212120
GATCTCG640050.07.939461120
GTAGATC812750.07.905949120
CGCCGTA287600.07.8854127120
GTGTAGA830200.07.833721120
CTCGGTG500200.07.8323307120
Produced by FastQC (version 0.11.5)