FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832284

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832284
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12468094
Sequences flagged as poor quality0
Sequence length58-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG68150.016.556856120
AAAAAAA1223900.014.21145120
TCATTAA420950.09.153568120
CGTATCA568500.08.994874120
TCTCGGG31250.08.83474120
ATCATTA480100.08.738389120
TGGTCGC892500.08.681684120
CATTAAA417950.08.673583120
GCCGTAT674100.08.600798120
GGTCGCC840900.08.579185120
CGCCGTA701150.08.560023120
GTCGCCG801650.08.542535120
GTATCAT557900.08.5310545120
CCGTATC653350.08.267658120
GTGGTCG962200.08.208738120
TATCATT569250.08.097372120
TCGCCGT765950.07.961212120
GGTGGTC1038500.07.917717120
CGGTGGT1140150.07.6961102120
TCGGTGG1202700.07.5204153120
Produced by FastQC (version 0.11.5)