FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14085157
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGG390500.07.928282120
TAGATCT430900.07.5609045120
GGTGGTC290300.07.4819016120
GTGGTCG270300.07.391773120
AGATCTC422700.07.338524120
TGGTCGC246150.07.190724118-119
TCTCGGT356500.07.1528616120
GTGTAGA554250.07.068999120
GGTCGCC255400.07.00077120
CGGTGGT337200.06.9750757120
CTCGGTG358350.06.948501120
TCGGTGG339750.06.8697443120
CGTATCA179050.06.8360667120
AGTGTAG558350.06.823664120
AAGAGTG682300.06.744821120
AGAGTGT626750.06.72037120
GATCTCG426800.06.7197623120
GTAGATC542250.06.638992120
GAGTGTA585200.06.5310884118-119
TGTAGAT600300.06.4567595120
Produced by FastQC (version 0.11.5)