FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15720151
Sequences flagged as poor quality0
Sequence length55-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC291100.08.338069120
TCGGTGG397650.07.765841120
TAGATCT506850.07.6218057120
GCGTCGG149400.07.560206120
GTGGTCG322050.07.4994445120
GGTGGTC351050.07.359119120
ATCTCGG484850.07.261337120
TCTCGGT436900.07.2331934120
GAGTGTA691600.07.0799303120
GTGTAGA643900.07.072568120
AGATCTC512300.07.036444120
AGTGTAG649450.07.012128120
CGGTGGT406200.06.936802120
GTAGATC643100.06.8104434120
CTCGGTG442900.06.766507118-119
CGTATCA194500.06.733847120
AAGAGTG802800.06.6530495120
AGAGTGT739950.06.6335506120
GATCTCG556600.06.4764113120
TGTAGAT672850.06.4736037120
Produced by FastQC (version 0.11.5)