FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832292

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832292
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15636758
Sequences flagged as poor quality0
Sequence length67-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG104350.013.184822120
AAAAAAA1506300.012.998826120
CCGTATC737000.09.146535120
CGTATCA649100.08.968987120
GGTCGCC1000350.08.912779120
CGCCGTA833050.08.777094120
GTATCAT652600.08.672316120
ATCATTA592100.08.665509120
TGGTCGC1051350.08.543289120
TCATTAA519700.08.462323120
TCTCGGG46150.08.461998120
CCCCCCC6500.00376006158.3101461
GTGGTCG1138950.08.234353120
TCGCCGT938000.08.128119120
GCCGTAT778700.08.085788120
CATTAAA514100.07.958491120
GTCGCCG991150.07.934718120
GGTGGTC1222900.07.7476854120
TATCATT687850.07.7474914120
CGGTGGT1333700.07.5905457120
Produced by FastQC (version 0.11.5)