FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832294

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832294
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19991658
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG705650.09.522795120
TGGTCGC652250.09.456159120
AAAAAAA1171750.09.3600235120
GGTGGTC769600.08.926395120
CTCGGTG969800.08.834496120
TCTCGGT1043050.08.587968120
GGTCGCC627050.08.467921120
TAGATCT1338950.08.460058120
TCGGTGG928700.08.430839120
AGATCTC1266500.08.3471155120
CGGTGGT880750.08.269929120
GATCTCG1202250.08.194342120
CGCCGTA543500.08.135864120
TCGCCGT601250.08.062914120
GTCGCCG629250.07.9234357120
CGTATCA458850.07.9107995120
ATCTCGG1122800.07.8657675118-119
GCGTCGG95850.07.824446120
GCCGTAT545900.07.649479120
GTGTAGA1695000.07.603268120
Produced by FastQC (version 0.11.5)