FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832306

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832306
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14435259
Sequences flagged as poor quality0
Sequence length61-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG81900.011.647454120
TGGTCGC277800.09.632088120
TAGATCT577000.09.524397120
GGTCGCC263900.09.320994120
AGTGTAG796850.09.320987120
AGATCTC552650.09.129849120
GTGGTCG299900.09.042318120
GATCTCG530200.08.916703120
TCGGTGG398550.08.746034120
GGTGGTC330800.08.596678120
TCTCGGT480350.08.580582120
GTGTAGA765750.08.46164120
CTCGGTG442700.08.456543120
GTAGATC753400.08.361447120
ATCTCGG506700.08.217247120
CGGTGGT386000.08.206622120
AGAGTGT934600.08.139754120
GAGTGTA860650.08.135085120
TGTAGAT795700.07.4306717118-119
GTCGCCG294550.07.353024120
Produced by FastQC (version 0.11.5)