FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832332

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832332
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14347581
Sequences flagged as poor quality0
Sequence length68-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG118000.010.169326120
TAGATCT691800.09.002456120
AGATCTC658250.08.841481120
CTCGGTG517900.08.549774120
ATCTCGG596550.08.549018120
TGGTCGC358550.08.450567120
GGTGGTC407700.08.403101120
TCGGTGG483900.08.158578120
GAGTGTA988250.08.092962120
CGTATCA235250.08.084884120
AGTGTAG922450.08.045835120
GATCTCG652850.07.9863906120
GTGTAGA890300.07.8376794120
TCTCGGT542000.07.748951118-119
GTAGATC903800.07.6077547120
GTGGTCG383950.07.5789886120
AGAGTGT1060600.07.569177120
AAGAGTG1155900.07.5316706120
CGGTGGT464000.07.448155120
TGTAGAT912050.07.4139466120
Produced by FastQC (version 0.11.5)