FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832344

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832344
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12155619
Sequences flagged as poor quality0
Sequence length65-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT330350.08.836621120
AGTGTAG441450.08.245471120
ATCTCGG315800.07.950391120
GTGTAGA436700.07.8950152120
TGTAGAT459200.07.6389785120
AGATCTC325100.07.557602118-119
GAGTGTA469700.07.479171118-119
TGGTCGC192750.07.1984982120
GTAGATC435100.07.192386120
TCTCGGT282300.07.191676120
GATCTCG344200.07.1547966120
AGAGTGT500200.07.143074118-119
CTCGGTG277600.07.118701120
TCGGTGG261200.06.898782120
GTGGTCG218550.06.8983817120
GGTGGTC229550.06.7509785120
AAGAGTG549000.06.662991120
TAGGGAA757000.06.498488120
CGGTGGT267700.06.48446120
TGTAGGG825750.06.3575115120
Produced by FastQC (version 0.11.5)