FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12827048
Sequences flagged as poor quality0
Sequence length55-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT262150.09.629373120
AGTGTAG365950.09.493026120
AGATCTC259700.09.2110615120
AGAGTGT429550.08.843046120
GTGTAGA359150.08.836018120
GAGTGTA393450.08.8142395120
AAGAGTG487800.08.563308120
GTAGATC376550.08.427714120
TAGGGAA698600.08.104401120
ATCTCGG251950.07.9676576120
TGTAGGG785750.07.916888120
GTGTAGG854350.07.8791747120
GTAGGGA735550.07.7299647120
GATCTCG288850.07.4908085120
GGGAAAG670400.07.441194120
AGGGAAA731550.07.386084120
TGTAGAT396950.07.3586645120
TCGTGTA962000.07.259883120
TCTCGGT222900.07.226421120
CGTGTAG908050.07.1881742120
Produced by FastQC (version 0.11.5)