FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832410

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832410
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12734974
Sequences flagged as poor quality0
Sequence length56-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA925800.011.80091120
GCGTCGG91500.09.442003120
CGTATCA391350.09.167663120
GTATCAT396200.08.586009120
CGCCGTA508450.08.318856120
TGGTCGC622900.08.292922120
GGTCGCC599050.08.292587120
TCATTAA314850.08.289117120
GCCGTAT481700.08.2328005120
GTGGTCG679700.08.076563120
CCGTATC461750.08.003807120
GGTGGTC731300.07.925092120
ATCATTA369450.07.924774120
TCGGTGG847250.07.768153120
CATTAAA313150.07.721032120
CGGTGGT805500.07.515336120
GTCGCCG609900.07.4958186120
TCGCCGT579600.07.483981120
CTCGGTG893900.07.4768553120
TATCATT430200.07.4332643120
Produced by FastQC (version 0.11.5)