FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832426

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832426
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13979859
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA796800.010.383431120
GTGGTCG593300.09.364025120
GGTCGCC525400.09.238136120
TGGTCGC542200.08.974025120
GCCGTAT424800.08.897787120
GGTGGTC660150.08.815664120
CGTATCA327400.08.741091120
GTCGCCG538900.08.71725120
CCGTATC391800.08.713121120
GTATCAT355250.08.646928120
TCGGTGG767000.08.479298120
CGCCGTA457950.08.266797120
ATCATTA330450.08.07942120
TCGCCGT523700.07.973566120
CGGTGGT734200.07.7957864120
CTCGGTG833000.07.7930627120
GATCTCG993150.07.4848375120
TCTCGGT874200.07.4669633118-119
ATCTCGG934900.07.4506297120
AGATCTC1025950.07.409286120
Produced by FastQC (version 0.11.5)