FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832428

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832428
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14500609
Sequences flagged as poor quality0
Sequence length56-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT450000.08.224294120
CTCGGTG380150.08.044392120
AGATCTC447550.07.9068613120
ATCTCGG414850.07.8349566120
AGTGTAG593100.07.759455120
GTAGATC589700.07.5596757120
GTGTAGA581450.07.5532765120
GATCTCG454600.07.5067053120
GTGGTCG291550.07.459779120
TCTCGGT384750.07.243414118-119
AAGAGTG754800.07.243357120
GGTCGCC279250.07.1859417120
TCGGTGG350300.07.1691318120
GAGTGTA632850.07.1106853120
AGAGTGT684800.06.992379120
GGTGGTC313250.06.8854733120
TGTAGAT597400.06.838709120
TAGGGAA996050.06.659143120
CGTATCA180100.06.4717007120
CGCCGTA265750.06.3075595120
Produced by FastQC (version 0.11.5)