FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18538075
Sequences flagged as poor quality0
Sequence length70-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT538650.09.188215120
GCGTCGG115050.09.042686120
AGATCTC520700.08.66187120
GTGGTCG307500.08.428885120
GTAGATC717300.08.283123120
AGTGTAG734900.08.272959120
GTGTAGA715400.08.204249120
AGAGTGT851550.08.191922120
CTCGGTG425350.08.185969120
GGTGGTC340800.08.152305120
TCGGTGG391200.08.039718120
GAGTGTA786900.07.955531120
TGGTCGC278250.07.86691120
ATCTCGG475850.07.8606467120
TCTCGGT437050.07.856751120
AAGAGTG937200.07.7833495120
GATCTCG514200.07.566764120
AAAGAGT1081800.07.2377234120
TGTAGAT765950.07.1681705120
GTAGGGA1379600.07.1618032120
Produced by FastQC (version 0.11.5)