FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11518720
Sequences flagged as poor quality0
Sequence length73-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG187250.09.519262120
TAGATCT356700.09.48953120
GGTGGTC209450.09.455887120
TGGTCGC169700.09.407375120
AGATCTC339350.09.125792120
ATCTCGG320050.09.094789120
TCTCGGT289600.09.056316120
AGTGTAG497400.08.916765120
GTGTAGA483350.08.728955120
GATCTCG334500.08.558368120
GCGTCGG66200.08.431282120
CGGTGGT248750.08.420367120
CTCGGTG274550.08.372324120
TCGGTGG256600.08.34988120
GAGTGTA535900.08.309767120
GTAGATC475300.07.942395120
GGTCGCC171400.07.878443120
TGTAGAT505850.07.8779826120
AGAGTGT578600.07.7070723118-119
AAGAGTG641100.07.63894120
Produced by FastQC (version 0.11.5)