FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13583997
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA853250.010.590018120
GGTCGCC453250.08.683886120
GCGTCGG82800.08.405735120
GTGGTCG506300.08.354669120
TGGTCGC462750.08.272224120
GGTGGTC548350.08.064134120
CGTATCA309750.08.038682120
CGGTGGT607900.07.8466277120
TCTCGGT720700.07.7174397120
ATCTCGG777500.07.6861167120
GATCTCG827600.07.670316120
CTCGGTG683250.07.6135554120
TAGATCT891800.07.55545120
CGCCGTA396300.07.554827120
TCGGTGG637650.07.424081120
AGATCTC853350.07.4107385120
CCGTATC357000.07.294064120
GTAGATC1124000.07.0782394120
GTGTAGA1117650.07.0594034120
GTCGCCG478050.06.9782977120
Produced by FastQC (version 0.11.5)