FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832446

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832446
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12095528
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA833900.011.483155120
GCGTCGG74100.010.283189120
TGGTCGC548650.09.131317120
GTGGTCG586500.08.848924120
CGTATCA346650.08.567543120
GGTGGTC642250.08.435794120
GTCGCCG519600.08.3832120
GGTCGCC522250.08.352151120
CGCCGTA470200.08.306933120
TCATTAA282700.08.298379120
TCGGTGG746150.08.153689120
GTATCAT359300.08.149012120
TCTCGGT837950.08.13397120
CCGTATC415850.08.07967120
GCCGTAT446750.08.071463120
CTCGGTG789450.08.048476120
TCGCCGT498850.07.926068120
CGGTGGT708600.07.730578120
GATCTCG962050.07.7208543120
ATCATTA320700.07.7079806120
Produced by FastQC (version 0.11.5)