FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14135158
Sequences flagged as poor quality0
Sequence length56-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2703600.015.274712120
GCGTCGG102750.012.379174120
TCTCGGG39150.011.800397120
TCATTAA931850.09.986274120
CATTAAA876850.09.627344120
CGTATCA1262150.09.350419120
GTATCAT1203400.09.293378120
TATCATT1178800.09.263369120
ATCATTA1035200.09.076224120
CCGTATC1402350.08.638086120
TTAAAAA887200.08.520925120
GCCGTAT1492000.08.452819120
ATTAAAA922700.08.446685120
CGCCGTA1587450.08.080632120
TCGCCGT1728550.08.021502120
GTCGCCG1849800.07.9887223120
GGTCGCC1937550.07.877744120
TAAAAAA937800.07.85644120
TGGTCGC2047200.07.5935493120
GTGGTCG2184500.07.27558120
Produced by FastQC (version 0.11.5)