FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832476

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832476
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12678945
Sequences flagged as poor quality0
Sequence length58-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC320600.09.808671120
GTGGTCG293200.09.640495120
TCGGTGG390750.09.598943120
TGGTCGC267200.09.567877120
GATCTCG519700.09.45744120
GCGTCGG68550.09.454938120
AGATCTC548100.09.284925120
GGTCGCC260700.09.207916120
CGGTGGT370350.09.17163120
TAGATCT581900.08.931244120
AGTGTAG806650.08.883039120
ATCTCGG501050.08.755455120
GTGTAGA775100.08.663926120
TCTCGGT453600.08.573228120
CTCGGTG422800.08.573227120
AGAGTGT941650.08.297817120
GAGTGTA869650.08.10151120
TGTAGAT802950.07.9523506120
GTAGATC817950.07.901897120
AAGAGTG1024800.07.741671120
Produced by FastQC (version 0.11.5)