FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13541705
Sequences flagged as poor quality0
Sequence length57-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG87650.09.924743120
TCGGTGG386950.09.442036120
AGATCTC536050.09.16604120
TAGATCT556900.09.092188120
GTGGTCG296550.09.063236120
TCTCGGT433850.08.988287120
GATCTCG528900.08.949662120
ATCTCGG469650.08.763003120
TGGTCGC267450.08.7259120
GTGTAGA731450.08.489046120
AGTGTAG762250.08.476596120
GGTGGTC327800.08.400535120
CTCGGTG423100.08.36589120
GTAGATC719400.08.2226095120
GGTCGCC273650.08.2212715120
CGGTGGT373650.07.9959035120
GAGTGTA814150.07.9214964120
TGTAGAT752900.07.785033120
AGAGTGT876500.07.4264455120
CGTATCA186850.07.3526783120
Produced by FastQC (version 0.11.5)