FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15005615
Sequences flagged as poor quality0
Sequence length55-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT237750.08.001617120
AGAGTGT363250.07.7152553120
AGTGTAG303900.07.6422157120
GAGTGTA325600.07.483085120
GTAGATC338050.07.349511120
TAGGGAA534700.07.2503905120
GTGTAGG644400.07.2360997120
GTGTAGA311400.07.1962595118-119
GTAGGGA555700.07.1815853120
CTCGGTG208150.07.00598120
ATCTCGG236100.06.9391413120
TGGTCGC146950.06.860863120
TCTCGGT208150.06.804162120
AAGAGTG412550.06.7932777120
TGTAGGG588800.06.75748120
GGTGGTC170650.06.6113577120
CGTGTAG678300.06.6090317120
GTGGTCG152650.06.5653625120
TGTAGAT375750.06.5642014120
TCGTGTA721200.06.5404234120
Produced by FastQC (version 0.11.5)