FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11900327
Sequences flagged as poor quality0
Sequence length52-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC253550.08.896741120
TAGATCT476500.08.39788120
ATCTCGG436650.08.298702120
GGTGGTC301150.08.287378120
GTGGTCG277250.08.179503120
CTCGGTG379250.08.099366120
TCGGTGG355100.08.058875120
GTGTAGA615000.08.047955120
AGATCTC460100.07.927898120
TCTCGGT393800.07.8153486120
GGTCGCC259600.07.718776120
AGTGTAG633900.07.703895120
GAGTGTA673600.07.4546986120
GCGTCGG100050.07.3155913120
GATCTCG470800.07.314458120
CGGTGGT349550.07.311508120
AAGAGTG785350.07.234248120
GTAGATC618250.07.1031938120
TGTAGAT630750.07.05754120
GCCTAGA12006.349081E-56.9992814120
Produced by FastQC (version 0.11.5)