FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832514

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832514
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12221209
Sequences flagged as poor quality0
Sequence length61-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC199200.08.974691120
TCTCGGT317550.08.8604120
CTCGGTG294200.08.747969120
GGTGGTC235200.08.595778120
TCGGTGG294150.08.4027405120
CGGTGGT280750.08.248219120
AGATCTC382650.08.183921120
TAGATCT391900.08.067296120
GGTCGCC202800.08.046251120
GTGGTCG218800.07.9239764120
ATCTCGG350550.07.7781534118-119
AGTGTAG512400.07.4697175120
GATCTCG381750.07.354606120
GTGTAGA508500.07.302849120
GCGTCGG60950.07.283676120
CGCCGTA176900.07.1895323120
GTAGATC509900.07.188674120
TCGCCGT217050.07.0481153120
GTCGCCG223200.06.9345474120
AGAGTGT588000.06.876622120
Produced by FastQC (version 0.11.5)