FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12362859
Sequences flagged as poor quality0
Sequence length56-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG195450.09.88489120
GCGTCGG63450.09.361711120
TGGTCGC176800.09.332588120
GATCTCG347150.09.298583120
TAGATCT372400.09.119236120
ATCTCGG325700.08.93461120
AGATCTC360800.08.913534120
AGTGTAG521350.08.792566120
CTCGGTG280100.08.782586120
TCTCGGT294800.08.772057120
TCGGTGG276550.08.656671120
CGGTGGT277750.08.576065120
GAGTGTA561500.08.56991120
AGAGTGT611350.08.509046120
AAGAGTG687050.08.444808120
GTGTAGA508800.08.313687120
GTAGATC503950.08.23892120
TGTAGAT531450.08.1061325120
GGTGGTC225250.08.07104120
GGTCGCC180700.07.8694043120
Produced by FastQC (version 0.11.5)