FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15231926
Sequences flagged as poor quality0
Sequence length56-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG111000.011.082645120
AAAAAAA873450.08.793961120
TGGTCGC467100.08.556121120
GTGGTCG507750.08.332047120
TAGATCT927000.08.273013120
GTAGGGG32700.08.258046120
AGATCTC893500.08.193657120
ATCTCGG800750.08.116037120
CCCCCTC22300.08.0715891
CCTAGTG6800.00566006457.94102051
CTCGGTG707200.07.9338117120
TCGGTGG649450.07.9278264120
GGTGGTC556000.07.9219813120
GATCTCG876350.07.854135120
AGTGTAG1215100.07.7782354120
GGTCGCC461900.07.7430286120
CGGTGGT629150.07.5636525120
TCTCGGT739100.07.54267120
CGTATCA321050.07.532601120
GTGTAGA1170600.07.4895244120
Produced by FastQC (version 0.11.5)