FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13257326
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1798900.015.803983120
ATCATTA725300.09.84694120
CATTAAA609400.09.807487120
TCATTAA651700.09.797667120
CCGTATC967800.09.787758120
GTATCAT821950.09.412556120
CGTATCA852550.09.356541120
GCCGTAT1040800.09.274397120
TATCATT833800.08.997828120
CGCCGTA1125100.08.905166120
ATTAAAA678750.08.442589120
GTCGCCG1333050.08.430716120
TGGTCGC1448150.08.395258120
TCGCCGT1241800.08.285959120
GCGTCGG104400.08.285126120
GGTCGCC1372000.08.261424120
TTAAAAA649400.08.250679120
GTGGTCG1558000.08.204295120
GGTGGTC1678550.07.572137120
CGGTGGT1817900.07.437768120
Produced by FastQC (version 0.11.5)